Index

_

__init__() (freegsnke.circuit_eq_metal.metal_currents method) (freegsnke.equilibrium_update.Equilibrium method) (freegsnke.GSstaticsolver.NKGSsolver method) (freegsnke.implicit_euler.implicit_euler_solver method) (freegsnke.inverse.Inverse_optimizer method) (freegsnke.jtor_refinement.Jtor_refiner method) (freegsnke.jtor_update.ConstrainBetapIp method) (freegsnke.jtor_update.ConstrainPaxisIp method) (freegsnke.jtor_update.Fiesta_Topeol method) (freegsnke.jtor_update.Jtor_universal method) (freegsnke.jtor_update.Lao85 method) (freegsnke.jtor_update.TensionSpline method) (freegsnke.limiter_func.Limiter_handler method) (freegsnke.linear_solve.linear_solver method) (freegsnke.machine_update.Machine method) (freegsnke.magnetic_probes.Probes method) (freegsnke.Myy_builder.Myy_handler method) (freegsnke.nk_solver_H.nksolver method) (freegsnke.nonlinear_solve.nl_solver method) (freegsnke.normal_modes.mode_decomposition method) (freegsnke.passive_structure.PassiveStructure method) (freegsnke.simplified_solve.simplified_solver_J1 method) (freegsnke.virtual_circuits.VirtualCircuit method) (freegsnke.virtual_circuits.VirtualCircuitHandling method)

A

adjust_psi_plasma() (freegsnke.equilibrium_update.Equilibrium method) apply_VC() (freegsnke.virtual_circuits.VirtualCircuitHandling method) Arnoldi_iteration() (freegsnke.nk_solver_H.nksolver method) Arnoldi_unit() (freegsnke.nk_solver_H.nksolver method)

assign_currents() (freegsnke.nonlinear_solve.nl_solver method) (freegsnke.virtual_circuits.VirtualCircuitHandling method) assign_currents_solve_GS() (freegsnke.nonlinear_solve.nl_solver method) (freegsnke.virtual_circuits.VirtualCircuitHandling method) assign_profile_parameter() (freegsnke.jtor_update.TensionSpline method)

B

Br() (freegsnke.magnetic_probes.Probes method) BrBz_coils() (freegsnke.magnetic_probes.Probes method) BrBz_plasma() (freegsnke.magnetic_probes.Probes method) broaden_mask() (freegsnke.limiter_func.Limiter_handler method) Btor() (freegsnke.magnetic_probes.Probes method) build_active_coil_dict() (in module freegsnke.build_machine) build_actives() (in module freegsnke.build_machine) build_bilinear_psi_interp() (freegsnke.jtor_refinement.Jtor_refiner method) build_control_br() (freegsnke.passive_structure.PassiveStructure method) build_control_bz() (freegsnke.passive_structure.PassiveStructure method) build_control_coils() (freegsnke.inverse.Inverse_optimizer method) build_control_currents() (freegsnke.inverse.Inverse_optimizer method) build_control_currents_Vec() (freegsnke.inverse.Inverse_optimizer method) build_control_psi() (freegsnke.passive_structure.PassiveStructure method) build_curr_vals_lsq() (freegsnke.inverse.Inverse_optimizer method) build_current_vec() (freegsnke.nonlinear_solve.nl_solver method) (freegsnke.virtual_circuits.VirtualCircuitHandling method) build_dIydI_j() (freegsnke.nonlinear_solve.nl_solver method) (freegsnke.virtual_circuits.VirtualCircuitHandling method) build_dIydI_noGS() (freegsnke.nonlinear_solve.nl_solver method) build_from_refined_jtor() (freegsnke.jtor_refinement.Jtor_refiner method)

build_full_current_vec() (freegsnke.inverse.Inverse_optimizer method) build_greens() (freegsnke.inverse.Inverse_optimizer method) build_isoflux_lsq() (freegsnke.inverse.Inverse_optimizer method) build_jtor_gradient_mask() (freegsnke.jtor_refinement.Jtor_refiner method) build_jtor_value_mask() (freegsnke.jtor_refinement.Jtor_refiner method) build_LCFS_mask() (freegsnke.jtor_refinement.Jtor_refiner method) build_linearization() (freegsnke.nonlinear_solve.nl_solver method) build_lsq() (freegsnke.inverse.Inverse_optimizer method) build_mask_from_hatIy() (freegsnke.Myy_builder.Myy_handler method) build_mask_inside_limiter() (freegsnke.limiter_func.Limiter_handler method) build_mask_to_refine() (freegsnke.jtor_refinement.Jtor_refiner method) build_Mmatrix() (freegsnke.linear_solve.linear_solver method) build_Myy_from_mask() (freegsnke.Myy_builder.Myy_handler method) build_null_points_lsq() (freegsnke.inverse.Inverse_optimizer method) build_passives() (in module freegsnke.build_machine) build_plasma_isoflux_lsq() (freegsnke.inverse.Inverse_optimizer method) build_plasma_vals() (freegsnke.inverse.Inverse_optimizer method) build_psi_vals_lsq() (freegsnke.inverse.Inverse_optimizer method) build_reduced_rect_domain() (freegsnke.limiter_func.Limiter_handler method) build_refining_filaments() (freegsnke.passive_structure.PassiveStructure method) build_tokamak_R_and_M() (in module freegsnke.machine_config) Bz() (freegsnke.magnetic_probes.Probes method)

C

calc_inverse_operator() (freegsnke.implicit_euler.implicit_euler_solver method) calc_lumped_plasma_resistance() (freegsnke.nonlinear_solve.nl_solver method) calculate_fluxloop_value() (freegsnke.magnetic_probes.Probes method) calculate_hatIy() (freegsnke.nonlinear_solve.nl_solver method) calculate_hatIy_GS() (freegsnke.nonlinear_solve.nl_solver method) calculate_linear_growth_rate() (freegsnke.linear_solve.linear_solver method) calculate_pickup_value() (freegsnke.magnetic_probes.Probes method) calculate_pseudo_rigid_projections() (freegsnke.linear_solve.linear_solver method) calculate_rel_tolerance_currents() (freegsnke.nonlinear_solve.nl_solver method) calculate_rel_tolerance_GS() (freegsnke.nonlinear_solve.nl_solver method) calculate_stability_margin() (freegsnke.linear_solve.linear_solver method) calculate_targets() (freegsnke.virtual_circuits.VirtualCircuitHandling method) calculate_VC() (freegsnke.virtual_circuits.VirtualCircuitHandling method) ceq_residuals() (freegsnke.simplified_solve.simplified_solver_J1 method) check_and_change_plasma_resistivity() (freegsnke.nonlinear_solve.nl_solver method) check_and_change_profiles() (freegsnke.nonlinear_solve.nl_solver method)

check_Myy() (freegsnke.Myy_builder.Myy_handler method) ConstrainBetapIp (class in freegsnke.jtor_update) ConstrainPaxisIp (class in freegsnke.jtor_update) controlBr() (freegsnke.passive_structure.PassiveStructure method) controlBz() (freegsnke.passive_structure.PassiveStructure method) controlPsi() (freegsnke.passive_structure.PassiveStructure method) core_mask_limiter() (freegsnke.limiter_func.Limiter_handler method) create_eq_key() (freegsnke.magnetic_probes.Probes method) create_green_psi_plasma() (freegsnke.magnetic_probes.Probes method) create_greens_B_oriented_coils() (freegsnke.magnetic_probes.Probes method) create_greens_B_oriented_plasma() (freegsnke.magnetic_probes.Probes method) create_greens_BrBz_plasma() (freegsnke.magnetic_probes.Probes method) create_greens_BrBz_single_coil() (freegsnke.magnetic_probes.Probes method) create_greens_psi_all_coils() (freegsnke.magnetic_probes.Probes method) create_greens_psi_single_coil() (freegsnke.magnetic_probes.Probes method) create_RZ_key() (freegsnke.passive_structure.PassiveStructure method) currents_from_hatIy() (freegsnke.nonlinear_solve.nl_solver method)

D

d2Ldb2() (in module freegsnke.switch_profile) d2Ldbdm() (in module freegsnke.switch_profile) d2Ldbdn() (in module freegsnke.switch_profile) d2Ldm2() (in module freegsnke.switch_profile) d2Ldmdn() (in module freegsnke.switch_profile) d2Ldn2() (in module freegsnke.switch_profile)

d2Ldpars2() (in module freegsnke.switch_profile) define_solver() (freegsnke.virtual_circuits.VirtualCircuitHandling method) dLdb() (in module freegsnke.switch_profile) dLdm() (in module freegsnke.switch_profile) dLdn() (in module freegsnke.switch_profile) dLdpars() (in module freegsnke.switch_profile) dot() (freegsnke.Myy_builder.Myy_handler method)

E

Equilibrium (class in freegsnke.equilibrium_update)

extract_index_mask() (freegsnke.limiter_func.Limiter_handler method) extract_plasma_pts() (freegsnke.limiter_func.Limiter_handler method)

F

F_function() (freegsnke.GSstaticsolver.NKGSsolver method) F_function_curr() (freegsnke.nonlinear_solve.nl_solver method) F_function_curr_GS() (freegsnke.nonlinear_solve.nl_solver method) F_function_psi() (freegsnke.nonlinear_solve.nl_solver method) Fiesta_Topeol (class in freegsnke.jtor_update) find_area() (in module freegsnke.refine_passive) force_build_Myy() (freegsnke.Myy_builder.Myy_handler method) forcing_term_eig_no_plasma() (freegsnke.circuit_eq_metal.metal_currents method) forcing_term_eig_plasma() (freegsnke.circuit_eq_metal.metal_currents method) forcing_term_no_eig_no_plasma() (freegsnke.circuit_eq_metal.metal_currents method) forcing_term_no_eig_plasma() (freegsnke.circuit_eq_metal.metal_currents method) forward_solve() (freegsnke.GSstaticsolver.NKGSsolver method) freeboundary() (freegsnke.GSstaticsolver.NKGSsolver method) freegsnke module freegsnke.build_machine module freegsnke.circuit_eq_metal module freegsnke.circuit_eq_plasma module freegsnke.equilibrium_update module freegsnke.GSstaticsolver module freegsnke.implicit_euler module freegsnke.inverse module freegsnke.jtor_refinement module

freegsnke.jtor_update module freegsnke.limiter_func module freegsnke.linear_solve module freegsnke.machine_config module freegsnke.machine_update module freegsnke.magnetic_probes module freegsnke.Myy_builder module freegsnke.nk_solver_H module freegsnke.nonlinear_solve module freegsnke.normal_modes module freegsnke.passive_structure module freegsnke.refine_passive module freegsnke.simplified_solve module freegsnke.switch_profile module freegsnke.virtual_circuits module full_stepper() (freegsnke.implicit_euler.implicit_euler_solver method)

G

generate_refinement() (in module freegsnke.refine_passive) generate_refinement_G() (in module freegsnke.refine_passive) generate_refinement_LH() (in module freegsnke.refine_passive) get_coil_currents() (freegsnke.magnetic_probes.Probes method) get_indexes_for_refinement() (freegsnke.jtor_refinement.Jtor_refiner method) get_plasma_current() (freegsnke.magnetic_probes.Probes method)

get_profiles_values() (freegsnke.nonlinear_solve.nl_solver method) get_rel_delta_psi() (freegsnke.GSstaticsolver.NKGSsolver method) get_rel_delta_psit() (freegsnke.GSstaticsolver.NKGSsolver method) get_vessel_currents() (freegsnke.nonlinear_solve.nl_solver method) greens_BrBz_all_coils() (freegsnke.magnetic_probes.Probes method) grid_greens() (freegsnke.Myy_builder.Myy_handler method) (in module freegsnke.circuit_eq_plasma)

H

hat_Iy_from_jtor() (freegsnke.limiter_func.Limiter_handler method)

hatIy1_iterative_cycle() (freegsnke.nonlinear_solve.nl_solver method)

I

IdtoIvessel() (freegsnke.circuit_eq_metal.metal_currents method) implicit_euler_solver (class in freegsnke.implicit_euler) initialise_setup() (freegsnke.magnetic_probes.Probes method) initialize_for_eig() (freegsnke.circuit_eq_metal.metal_currents method) initialize_for_no_eig() (freegsnke.circuit_eq_metal.metal_currents method) initialize_from_equilibrium() (freegsnke.equilibrium_update.Equilibrium method) initialize_from_ICs() (freegsnke.nonlinear_solve.nl_solver method)

internal_stepper() (freegsnke.implicit_euler.implicit_euler_solver method) interp_on_limiter_points() (freegsnke.limiter_func.Limiter_handler method) interp_on_limiter_points_cell() (freegsnke.limiter_func.Limiter_handler method) Inverse_optimizer (class in freegsnke.inverse) inverse_solve() (freegsnke.GSstaticsolver.NKGSsolver method) IvesseltoId() (freegsnke.circuit_eq_metal.metal_currents method) Iy_from_jtor() (freegsnke.limiter_func.Limiter_handler method)

J

Jtor_build() (freegsnke.jtor_update.Jtor_universal method) Jtor_refined() (freegsnke.jtor_update.Jtor_universal method)

Jtor_refiner (class in freegsnke.jtor_refinement) Jtor_universal (class in freegsnke.jtor_update) Jtor_unrefined() (freegsnke.jtor_update.Jtor_universal method)

L

Lao85 (class in freegsnke.jtor_update) Lao_parameters() (freegsnke.jtor_update.ConstrainBetapIp method) (freegsnke.jtor_update.ConstrainPaxisIp method) (freegsnke.jtor_update.Fiesta_Topeol method) Lao_parameters_finder() (in module freegsnke.switch_profile)

Limiter_handler (class in freegsnke.limiter_func) limiter_points() (freegsnke.limiter_func.Limiter_handler method) linear_solver (class in freegsnke.linear_solve) load_data_dicts() (in module freegsnke.build_machine) Lpars() (in module freegsnke.switch_profile)

M

Machine (class in freegsnke.machine_update) make_blended_hatIy_() (freegsnke.nonlinear_solve.nl_solver method) make_layer_mask() (freegsnke.limiter_func.Limiter_handler method) make_selected_mode_mask() (freegsnke.circuit_eq_metal.metal_currents method) metal_currents (class in freegsnke.circuit_eq_metal) Mey() (freegsnke.circuit_eq_metal.metal_currents method) mode_decomposition (class in freegsnke.normal_modes) module freegsnke freegsnke.build_machine freegsnke.circuit_eq_metal freegsnke.circuit_eq_plasma freegsnke.equilibrium_update freegsnke.GSstaticsolver freegsnke.implicit_euler freegsnke.inverse freegsnke.jtor_refinement freegsnke.jtor_update freegsnke.limiter_func freegsnke.linear_solve freegsnke.machine_config freegsnke.machine_update freegsnke.magnetic_probes freegsnke.Myy_builder freegsnke.nk_solver_H freegsnke.nonlinear_solve freegsnke.normal_modes freegsnke.passive_structure freegsnke.refine_passive freegsnke.simplified_solve freegsnke.switch_profile freegsnke.virtual_circuits

Myy() (in module freegsnke.circuit_eq_plasma) Myy_handler (class in freegsnke.Myy_builder)

N

NKGSsolver (class in freegsnke.GSstaticsolver) nksolver (class in freegsnke.nk_solver_H) nl_solver (class in freegsnke.nonlinear_solve)

nlstepper() (freegsnke.nonlinear_solve.nl_solver method) normal_modes_greens() (freegsnke.normal_modes.mode_decomposition method) normalize_sum() (freegsnke.limiter_func.Limiter_handler method)

O

optimize_currents() (freegsnke.GSstaticsolver.NKGSsolver method) (freegsnke.inverse.Inverse_optimizer method)

optimize_plasma_psi() (freegsnke.inverse.Inverse_optimizer method)

P

PassiveStructure (class in freegsnke.passive_structure) plot() (freegsnke.inverse.Inverse_optimizer method) (freegsnke.magnetic_probes.Probes method) (freegsnke.passive_structure.PassiveStructure method) port_critical() (freegsnke.GSstaticsolver.NKGSsolver method) prepare_build_dIydI_j() (freegsnke.nonlinear_solve.nl_solver method) (freegsnke.virtual_circuits.VirtualCircuitHandling method) prepare_for_plasma_optimization() (freegsnke.inverse.Inverse_optimizer method)

prepare_for_refinement() (freegsnke.jtor_refinement.Jtor_refiner method) prepare_for_solve() (freegsnke.inverse.Inverse_optimizer method) prepare_plasma_psi() (freegsnke.inverse.Inverse_optimizer method) prepare_plasma_vals_for_plasma() (freegsnke.inverse.Inverse_optimizer method) prepare_solver() (freegsnke.simplified_solve.simplified_solver_J1 method) Probes (class in freegsnke.magnetic_probes) psi_floop_all_coils() (freegsnke.magnetic_probes.Probes method) psi_from_plasma() (freegsnke.magnetic_probes.Probes method) psi_func() (freegsnke.equilibrium_update.Equilibrium method)

R

rebuild_full_current_vec() (freegsnke.inverse.Inverse_optimizer method) rebuild_map2d() (freegsnke.limiter_func.Limiter_handler method) reduce_rect_domain() (freegsnke.limiter_func.Limiter_handler method) relative_del_residual() (freegsnke.GSstaticsolver.NKGSsolver method) relative_norm_residual() (freegsnke.GSstaticsolver.NKGSsolver method) remove_modes() (freegsnke.nonlinear_solve.nl_solver method) reset_mode() (freegsnke.circuit_eq_metal.metal_currents method)

reset_plasma_resistivity() (freegsnke.linear_solve.linear_solver method) (freegsnke.nonlinear_solve.nl_solver method) (freegsnke.simplified_solve.simplified_solver_J1 method) reset_timestep() (freegsnke.nonlinear_solve.nl_solver method) reset_timesteps() (freegsnke.circuit_eq_metal.metal_currents method) (freegsnke.linear_solve.linear_solver method) (freegsnke.simplified_solve.simplified_solver_J1 method)

S

select_refinement() (freegsnke.jtor_update.Jtor_universal method) self_ind_circular_loop() (in module freegsnke.machine_config) set_linear_solution() (freegsnke.nonlinear_solve.nl_solver method) set_linearization_point() (freegsnke.linear_solve.linear_solver method) set_Lmatrix() (freegsnke.implicit_euler.implicit_euler_solver method) set_masks() (freegsnke.jtor_update.Jtor_universal method) set_Mmatrix() (freegsnke.implicit_euler.implicit_euler_solver method) set_plasma_resistivity() (freegsnke.nonlinear_solve.nl_solver method) set_refinement_thresholds() (freegsnke.jtor_update.Jtor_universal method)

set_Rmatrix() (freegsnke.implicit_euler.implicit_euler_solver method) set_timesteps() (freegsnke.implicit_euler.implicit_euler_solver method) simplified_solver_J1 (class in freegsnke.simplified_solve) solve() (freegsnke.GSstaticsolver.NKGSsolver method) source_domain_properties() (freegsnke.inverse.Inverse_optimizer method) step_complete_assign() (freegsnke.nonlinear_solve.nl_solver method) stepper() (freegsnke.circuit_eq_metal.metal_currents method) (freegsnke.linear_solve.linear_solver method) (freegsnke.simplified_solve.simplified_solver_J1 method)

T

TensionSpline (class in freegsnke.jtor_update) tokamak() (in module freegsnke.build_machine) Topeol_opt() (in module freegsnke.switch_profile)

Topeol_opt_init() (in module freegsnke.switch_profile) Topeol_opt_stepper() (in module freegsnke.switch_profile) Topeol_parameters() (freegsnke.jtor_update.Lao85 method) Topeol_std() (in module freegsnke.switch_profile)

U

unstable_mode_deformations() (freegsnke.nonlinear_solve.nl_solver method)

V

VirtualCircuit (class in freegsnke.virtual_circuits)

VirtualCircuitHandling (class in freegsnke.virtual_circuits)